News, Events and Blog Postings

A Study On Livestock Keepers In Korogocho And Viwandani Slums

A Study On Livestock Keepers In Korogocho And Viwandani Slums

The study aims to determine the prevalence and distribution of pathogenic E. coli, Salmonella and Campylobacter serovars and antibiotic resistance pat-terns of the same isolates from livestock in selected households from Korogocho and Viwandani slum and the quantification of the risk factors known to spread the organisms. This activity also contributes to providing the main project with a large bank of bacterial isolates from the livestock in the low income settlements to complement the human data from the case control study. Additional human isolates from livestock keepers have been collected (return rate approx. 30%, see above).

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Case Control Study: UPDATE

Case Control Study: UPDATE

The case-control study which was looking at causation and risk factors of diarrhoea in children under 5 in two low-income settlements in Nairobi came to en end last April. Among the 637 children included in the study, 190 were cases (children with diarrhoea) and 447 were controls (children without diarrhoea). Stool samples from each child have been sent to the laboratory at KEMRI where parasitological and bacteriological analysis has been performed. Antimicrobial resistance is also currently being assessed.

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Camel Value Chain In Kenya

Camel Value Chain In Kenya

Only 12% of the camel milk produced in Kenya is marketed. From these 12%, 10% is sold to rural consumers while the remaining 2% reaches urban consumers. It was projected that 38% of the milk produced is consumed directly by camel keeping households, with the remaining 50% going to waste. Most of the camel milk is consumed in raw form, either fresh or naturally fermented. This can expose consumers to infections from brucellosis and other milk borne infections.

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VALUE CHAIN – Field Work Update

VALUE CHAIN – Field Work Update

The Value Chain team is comprised of four people- James Akoko, Maurice Karani, Patrick Muinde (ILRI) and Pablo Alarcon (RVC) who have, since the last newsletter, been involved in quantitative data collection from retailers and livestock holders in Nairobi. The aim is to understand what are the livestock food systems in different areas of Nairobi, and what are the main food safety practices. We work closely with APHRC and the Department of Veterinary Services.

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The Nutrition Seed Project

The Nutrition Seed Project

The Seed project is pilot research looking at the links between livestock value chains (LVCs) and nutrition outcomes in poor urban residents of Nairobi. Our aim is to investigate the relationship between consumers’ access to and use of different animal-food sources and their nutritional status.

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Dairy Value Chains Study In Nairobi, Kenya

Dairy Value Chains Study In Nairobi, Kenya

The dairy study is organized in two main phases; i) that of value chain analysis and ii) a laboratory component that will utilize genetic mapping tools to describe pathogen diversity and trans-mission using E. coli as a marker. Both formal and informal production and marketing systems will be examined.

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LAB REPORTS: KEMRI & University of Nairobi

LAB REPORTS: KEMRI & University of Nairobi

From the ongoing case control study at both Korogocho and Viwandani study sites, a total of 327 samples have been analyzed {water 146; food 134 and surface swabs 47} at University of Nairobi, Department of Public Health, Pharmacology and Toxicology. Of the samples analyzed 67% (219) had bacteria growth {97 water on Aqua 3M petri film plates, 96 food and 26 swab samples on 3M enterobacteriaceae petri film plates}. The study has so far isolated, identified and stocked Escherichia coli (109), Salmonella spp(8) and Shigella spp(6) from 108 samples.

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Investigation Of Livestock Value Chains

Investigation Of Livestock Value Chains

The Economic Thread has two aims: (1) To describe, map and understand the livestock value chains operating in the city of Nairobi and (2) to explore the possible hazards for emergence of foodborne zoonotic pathogens existing on those chains and peoples’ perception towards risks.

Data are being collected for a qualitative analysis (through focus groups or interviews with key people in the chain) and quantitative analysis (individual interview with a sample of people of each group, such as transporters).

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Our Work in Pictures

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March 25, 2015www.zoonotic-diseases.org goes live! [...]
March 25, 2015Applications open for post-doctoral position jointly with Achim Schnauffer’s group (IIIR, Edinburgh) and funded by CIIE The Zoonotic and Emerging Disease group studies a range of epidemiological issues revolving around the domestic livestock, wildlife and human interface [...]
March 25, 2015Article on the burden of Human African Trypanosomiasis published in PLoS Neglected Tropical Diseases [...]
March 25, 2015Eric Fèvre speaking at the ‘Living with Climate Change (LWEC)” Health Workshop hosted by the Scottish Government (on globalisation, trade and animal disease) [...]
March 25, 2015Article on peri-urban brucellosis in Uganda published in the Annals of the New York Academy of Science [...]
March 25, 2015We co-authored an article reporting progress on the mapping of the population at risk of sleeping sickness, “Towards the Atlas of human African trypanosomiasis,” published in the International Journal of Health Geographics [...]
March 25, 2015We participated in the World Health Organization’s latest output on neglected zoonoses: “Integrated Control of Neglected Zoonotic Diseases in Africa: Applying the ‘One Health’ Concept.”  Now available with full text on-line here [...]
March 25, 2015We co-authored an article reporting the results of a pilot study on the epidemiology of cysticercosis (Taenia solium) in Uganda, published in the Journal of Parasitology Research [...]
March 25, 2015We are taking informal inquiries from interested parties relating to a research assistant post on quantifying the burden of communicable diseases in Europe [...]
March 25, 2015We welcome Cheryl Gibbons, who is working on estimating the burden of infectious diseases, to the group [...]
March 25, 2015Nicola Batchelor publishes key work on the spatial epidemiology of sleeping sickness in Uganda in PLoS NTD [...]
March 25, 2015Applications are no longer being accepted for the PhD position on the epidemiology of neglected, zoonotic diseases. The Zoonotic and Emerging Disease group studies a range of epidemiological issues revolving around the domestic livestock, wildlife and human interface [...]
March 25, 2015We welcome James Akoko, Omoto Lazarus, Alice Kiyonga and Edward Onkendi to the group.  [...]
March 25, 2015Our paper on the comparative value of diagnostic tests for animal trypanosomiasis in Western Kenya is published in PLoS ONE [...]
March 25, 2015Our jointly-authored paper on serological patterns of zoonotic infections in cattle in Cameroon is published in PLoS ONE [...]
March 25, 2015The British Veterinary Association newsletter for Feb 2010 features an article on Lian Doble’s research in Western Kenya [...]
March 25, 2015We welcome John Mwaniki, Hannah Kariuki, Fredrick Opinya and Jenipher Ambaka to the group, who come to use through our collaboration with the Kenya Medical Research Institute (KEMRI). See staff page [...]
March 25, 2015The Veterinary Record features the activities of the PAZ project on neglected zoonoses in Kenya [...]
March 25, 2015We are very pleased to announce the start of our latest project on the drivers of the emergence of zoonotic and food-borne diseases in urban environments, funded through the MRC/LWEC ESEI scheme [...]
March 25, 2015The International Livestock Research Institute features the work of the PAZ Project on the ILRI blog [...]
March 25, 2015We welcome Katie Hamilton to the group; Katie will be working on preparing a research programme on urban zoonotic diseases in Kenya [...]
March 25, 2015We welcome William de Glanville and Annie Cook to the group; Will and Annie are starting PhD programmes focussing in different aspects of zoonotic disease epidemiology [...]
March 25, 2015Our jointly authored publication, led by Lucas Matemba on the burden of human sleeping sickness in Tanzania is published in PLoS Neglected Tropical Diseases [...]
March 25, 2015Our analysis of the risk of brucellosis transmission through the milk distribution network in Kampala, Uganda, led by Kohei Makita, is published in PLoS ONE [...]
March 25, 2015Our research group was part of the 3rd International Conference on Neglected Zoonotic Diseases at WHO, Geneva; this has resulted in a position statement on neglected zoonoses issued by WHO [...]
March 25, 2015We welcome Elijah Juma to the group, working on his MSc project at the University of Nairobi, on human behaviour and the risk of parasitic disease transmission. [...]
March 25, 2015Applications are now CLOSED for the recently advertised Clinical Officer and Community Health Worker posts. [...]
March 25, 2015The Good Practice Guide for Quantitative Veterinary Epidemiology, which we have been involved with developing, is released this month [...]
March 25, 2015The work of our project on zoonoses in livestock and humans in Western Kenya features on the Catalyst Programme on Australia’s ABC television [...]
March 25, 2015We welcome Daniel Cheruiyot and Lorren Alumasa, both Clinical Officers, to the team in Busia [...]
March 25, 2015Congratulations to MSc student Elija Juma, who has been selected to attend ”Advances in knowledge of parasite resistance of ruminant hosts ” taking place in São Paulo, Brazil in September 2011 [...]
March 25, 2015Applications for the ILRI-AusAid-CSIRO sponsored PhD position on African Swine Fever epidemiology are now closed. [...]
March 25, 2015Lian Doble and Annie Cook participate in the Advanced Epidemiology Course at the South African Centre for Epidemiological Modelling and Analysis (SACEMA) [...]
March 25, 2015We welcome Hannah Johnson (University of Edinburgh UK) and Mason Jager (Cornell University USA), summer undergraduate students working on the PAZ project [...]
March 25, 2015We are participating in a World Rabies Day dog vaccination and rabies awareness activity in Kiambu West District of Kenya – this is managed by the Kenya Women’s Veterinary Association (KVWA) [...]
March 25, 2015Our group co-hosts (with ILRI) a workshop on developments in pen-side diagnostics for Taenia solium cysticercosis. [...]
March 25, 2015Results of studies investigating brucellosis in Kampala, Uganda, on herd prevalence/risk factors and spatial distribution of human cases, are published [...]
March 25, 2015Dorte Dopfer from the University of Wisconsin-Madison School of Veterinary Medicine visits our Kenyan projects with a UW Global Health Institute award [...]
March 25, 2015The World Health Organization releases the Atlas of Human African Trypanosomiasis, which received contributions from our group [...]
March 25, 2015Our group is represented at a Joint Colloquium on Zoonoses and Neglected Infectious Diseases of Africa, in Johannesburg, South Africa [...]
March 25, 2015The PAZ Busia Laboratory molecular and serological diagnostic facility is built – in association with the ILRI/BecA AusAid-CSIRO African Swine Fever project [...]
March 25, 2015ILRI publishes a series of posts on the ILRI-BioLives blog, entitled “A Day in the Life of the PAZ Project” [...]
March 25, 2015We begin our work (with our many partners) on an ESEI-funded project on disease emergence in urban Kenya [...]
March 25, 2015The Wellcome Trust publishes a blog posting highlighting our work on zoonoses. [...]
March 25, 2015LCIRAH PhD opportunity on Campylobacter in Kenya and the UK, applications now CLOSED [...]
March 25, 2015Listen to the April edition of Edinburgh’s School of Biology ‘BioPod’ podcast, which features our PAZ project in Kenya [...]
March 25, 2015We are pleased to welcome Sonia Fèvre from Veterinarians Without Borders Canada (VWB/VSF), who visited our field sites in Kenya on a fact finding mission [...]
March 25, 2015Two funded PhD positions on 1) clinical epidemiology of diarrhoea b) role of peri-domestic wildlife in urban pathogen emergence – now closed [...]
March 25, 2015Statistical modelling PhD position now closed – we are no longer accepting applications [...]
March 25, 2015Postdoctoral research fellowship in statistical epidemiology – applications now closed [...]
March 25, 2015Congratulations to Annie Cook for winning the best poster prize at the recent International Society for Veterinary Epidemiology and Economics (ISVEE) meeting. Click to view  ISVEE2012 poster EAJ Cook [...]
March 25, 2015Sam Kariuki, our collaborator on the ‘Epidemiology, ecology and socio-economics of disease emergence in Nairobi’ project, wins the 2012 Royal Society Pfizer Award. Congratulations! [...]
March 25, 2015Nicola Wardrop, MRC Fellow at the Department of Geography, University of Southampton, visits our group at ILRI to discuss collaboration and presents a seminar. [...]
March 25, 2015Our work on urban zoonoses features in a news article from the US newspaper the “Global Post”: Urban farming: A lesson from Africa. [...]
March 25, 2015The laboratory technician job opening, through the International Livestock Research Institute in Nairobi, is now closed for applications. [...]
March 25, 2015We are recruiting two clinical officers (closing date 16 Jan) through the International Livestock Research Institute to support a project on urban zoonoses. [...]
March 25, 2015Nicola Wardrop et al publish a paper on landscape associated risk of human African trypanosomiasis, in BMC Infectious Diseases [...]
March 25, 2015Members of our research group share results and participate in the USDA-USAID-ILRI workshop on “An integrated Approach to Controlling Brucellosis in Africa” [...]
March 25, 2015Clinical officer posts now closed for applications.  Thanks for your interest. [...]
March 25, 2015Our University of Nairobi partners on the “Urban Zoo” project are recruiting a laboratory technologist and an enumerator for the project. [...]
March 25, 2015We welcome Pablo Alarcon from the Royal Veterinary College to our urban zoonoses project team [...]
March 25, 2015Pork tapeworms make headline news in Australia [...]
March 25, 2015All Kenya-based field activities in the group are put on hold for one week during the national elections which take place on 4 March 2013. [...]
March 25, 2015Lian Thomas, Will de Glanville, Annie Cook and Eric Fèvre publish the first study of free range domestic pig ecology, in BMC Veterinary Research [...]
March 25, 2015Eric Fèvre and Will de Glanville are at WHO, Geneva, for the Fifth Foodborne Disease Burden Epidemiology Reference Group (FERG) meeting [...]
March 25, 2015Annie Cook attends the 23rd European Congress of Clinical Microbiology and Infectious Diseases in Berlin, Germany [...]
March 25, 2015James Akoko, Velma Kivali and Alice Kiyong’a attend the Kenya Veterinary Association conference in Mombasa, Kenya [...]
March 25, 2015Our study of free range pig ecology in Kenya gets press attention, including at the Kenyan Standard newspaper (print only) and the The People newspaper [...]
March 25, 2015PhD opportunity: “Peri-domestic wildlife in urban Nairobi: ecology and epidemiological role in zoonotic pathogen emergence” Now closed – thanks for your interest The Zoonotic and Emerging Disease group studies a range of epidemiological issues revolving around the domestic livestock, wildlife and human interface [...]
March 25, 2015Our group has moved!  Our new institutional affiliation is the Institute of Infection and Global Health, University of Liverpool.  We are still physically based at ILRI, Nairobi [...]
March 25, 2015Velma Kivali attends a Leverhulme Trust sponsored workshop on “Molecular Systematics, DNA Barcoding and Bioinformatics” Sokoine University of Agriculture, Tanzania [...]
March 25, 2015We are presenting work on the livestock-human-wildlife interface at AITAM in South Africa [...]
March 25, 2015Paper published: “The dispersal ecology of Rhodesian sleeping sickness following its introduction to a new area” in PLoS NTD [...]
March 25, 2015The first Urban Zoonoses project Quarterly Newsletter is out! Urban Zoo Newsletter November 2013 [...]
March 25, 2015Annie Cook wins 3rd Prize at the Medical Research Council Centenary ‘Celebration of International Collaboration’ for early career researchers in London. [...]
March 25, 2015Paper published: “The global burden of foodborne parasitic diseases” in Trends in Parasitology [...]
March 25, 2015 UrbanZoo research technician posts now filled.  Thanks for your interest [...]
March 25, 2015 Will de Glanville publishes on “Spatial multi-criteria decision analysis to predict suitability for African swine fever endemicity in Africa,” in BMC Vet. Research [...]
March 25, 2015Our paper published: “Incorporating Scale Dependence in Disease Burden Estimates: The Case of Human African Trypanosomiasis in Uganda” in PLoS NTD [...]
March 25, 2015Output of our ECDC collaboration published. [...]
March 25, 2015Issue 02 of the Urban Zoo newsletter is Urban Zoo Newsletter Issue 02 Feb 2014 [...]
March 25, 2015Our team is at two Kenyan conferences during the week of 23rd April…. [...]
March 25, 2015Welcoming Maurice Karani and Patrick Muinde [...]
March 25, 2015We welcome postdoc molecular biologist Gemma Chaloner to the team in Liverpool. [...]
March 25, 2015 We are very pleased to announce our new major funding award: “Zoonoses in Livestock in Kenya (ZooLinK)”, funded by the ZELS programme [...]
March 25, 2015We are jointly hosting a workshop in Nairobi with CIIE Edinburgh on phylogenetics: “From Faeces to Phylogenetics” [...]
April 8, 2015Sam Kariuki, our collaborator on the ‘Epidemiology, ecology and socio-economics of disease emergence in Nairobi’ project, wins the 2012 Royal Society Pfizer Award. Congratulations! The Zoonotic and Emerging Disease group studies a range of epidemiological issues revolving around the domestic livestock, wildlife and human interface [...]

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